BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB007A03SP1|AL425617
(629 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1410 1160 0.0
>3x_Contig1410
Length = 7640
Score = 1160 bits (579), Expect = 0.0
Identities = 612/629 (97%)
Strand = Plus / Minus
Query: 1 agtcgacataagtaaytcagtttaattctctgaagggtacttgctagttctagtgtctct 60
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6954 agtcgacataagtaactcagtttaattctctgaagggtacttgctagttctagtgtctct 6895
Query: 61 aactttccgctcttctgtagagtaacacctgacaactctttacaccgttataatgatggg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6894 aactttccgctcttctgtagagtaacacctgacaactctttacaccgttataatgatggg 6835
Query: 121 ttaaagatcgtwatcacaggtttaagggtacagggtacgatgctggacaacttgatttga 180
||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6834 ttaaagatcgttatcacaggtttaagggtacagggtacgatgctggacaacttgatttga 6775
Query: 181 aatgacacacattatgggtttgggggaagatttaaggctgcactaaggstgggtaatgaa 240
|||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 6774 aatgacacacattatgggtttgggggaagatttaaggctgcactaaggctgggtaatgaa 6715
Query: 241 atctcaccttctaccacgtgataagcatctaacgagatgagcagcgaacctgttcccact 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6714 atctcaccttctaccacgtgataagcatctaacgagatgagcagcgaacctgttcccact 6655
Query: 301 aacttcccgtccacagacattacattcgatgtaaacggcggagtctgcttgctttgcctt 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6654 aacttcccgtccacagacattacattcgatgtaaacggcggagtctgcttgctttgcctt 6595
Query: 361 accgtgtatatccaatgttcctgacgggtcagcgtaatacggtttagcatccgggaattg 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6594 accgtgtatatccaatgttcctgacgggtcagcgtaatacggtttagcatccgggaattg 6535
Query: 421 cagtttcagaagstttgtgttgmgtgtttgaggggagamgatmtgttggatgatagaagt 480
|||||||||||| ||| | || ||||||| | |||| ||| | |||||||||||||||
Sbjct: 6534 cagtttcagaagctttctcttcactgtttgacgcgagatgatatcttggatgatagaagt 6475
Query: 481 aagaatgttctgatatatggaatcggsaaccgaatctgtggtcaaagaagcagtcatggt 540
|||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 6474 aagaatgttctgatatatggaatcggcaaccgaatctgtggtcaaagaagcagtcatggt 6415
Query: 541 tacagccacctcttgatagttgsaaatactgaataagtcaagtcagtactgttgtcttat 600
|||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 6414 tacagccacctcttgatagttgcaaatactgaataagtcaagtcagtactgttgtcttat 6355
Query: 601 gtctgawcgtagaacagaattgattgttt 629
|||||| ||||||||||||||||||||||
Sbjct: 6354 gtctgatcgtagaacagaattgattgttt 6326
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.39 0.713 1.32
Gapped
Lambda K H
1.39 0.713 1.32
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 2849
Number of Sequences: 1807
Number of extensions: 2849
Number of successful extensions: 52
Number of sequences better than 1.0e-20: 1
length of query: 629
length of database: 10,358,551
effective HSP length: 16
effective length of query: 613
effective length of database: 10,329,639
effective search space: 6332068707
effective search space used: 6332068707
T: 0
A: 40
X1: 5 (10.0 bits)
X2: 14 (28.0 bits)
S1: 12 (24.5 bits)
S2: 50 (100.7 bits)